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Bugzilla
Bug tracking used by the Mozilla projects. Inherently web-based, written in Perl, and uses MySQL as its database back-end. Open-Source. Updates available via CVS.
http://www.bugzilla.org/
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http://trac.edgewall.org/
Web-based software project management and bug/issue tracking system. Provides an interface to Subversion and an integrated wiki.
http://trac.edgewall.org/
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http://mantisbt.sourceforge.net/
php/MySQL/web based bugtracking system.
http://mantisbt.sourceforge.net/
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http://roundup.sourceforge.net/
A simple-to-use and -install issue-tracking system with command-line, web and e-mail interfaces.
http://roundup.sourceforge.net/
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RT: Request Tracker
A free web and email-based bug tracking and trouble ticketing system. Features list, documentation screen shots, and download.
http://www.bestpractical.com/rt/
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Flyspray
Open source, web based bug tracking system written with a focus on ease-of-use.
http://www.flyspray.org/
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BugTracker.NET
Opensource web-based bug tracker written using ASP.NET and C#.
http://btnet.sourceforge.net
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phpBugTracker
A web-based bug tracking system built in PHP.
http://phpbt.sourceforge.net/
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IssueTrackerProduct
Open-source web-based issue/bug tracker, written in Python.
http://www.issuetrackerproduct.com/
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Debian Bug Tracking Software
GPL'd Perl-5 scripts which maintain a database of problem reports. Input by email, listings via webserver.
http://www.chiark.greenend.org.uk/~ian/debbugs/
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